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RE: CTAD2

in #ctad4 years ago (edited)

SARS-CoV-2-3CL-M-pro-active-site-architecture-indicating-the-positions-of-substrate.png

Direct Observation of Protonation State Modulation in SARS-CoV-2 Main Protease upon Inhibitor Binding with Neutron CrystallographyDaniel W. Kneller

https://pubs.acs.org/doi/10.1021/acs.jmedchem.1c00058

Protonation states in SARS-CoV-2 main protease mapped by neutron crystallography

https://www.researchgate.net/publication/345361805_Protonation_states_in_SARS-CoV-2_main_protease_mapped_by_neutron_crystallography

https://pubmed.ncbi.nlm.nih.gov/33060199/

Overview of antiviral drug candidates targeting coronaviral 3C‐like main proteases

..

https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.15696

Cas13-induced cellular dormancy prevents the rise of CRISPR-resistant bacteriophage

https://www.nature.com/articles/s41586-019-1257-5

CRISPR Enzyme Protects Bacteria by Turning Infected Cells on Themselves

https://www.hhmi.org/news/crispr-enzyme-protects-bacteria-turning-infected-cells-themselves

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3CL Mpro; 3CL main protease; SARS–CoV-2; SARS–CoV-2 3CL main protease; X-ray crystallography; drug design; enzyme mechanism; hydrogen bond; joint neutron; neutron diffraction; protonation state; room temperature; viral protease.

Acid-Base Catalysis

https://www.sciencedirect.com/topics/materials-science/acid-base-catalysis

https://www.creative-enzymes.com/resource/Acidbase-Catalysis_40.html

Acid-Base Catalysis

In enzyme-mediated catalysis, general acid-base catalysis occurs when an acidic or basic residue at the active site is used to facilitate proton transfers in the reaction. As an example of general acid-base (and covalent) catalysis.

Double Displacement Reactions (Salt Metathesis)

Double displacement reactions are also known as salt metathesis reactions or double replacement reactions. Like any other chemical reaction, these chemical reactions also involve the conversion of certain chemical compounds (ionic or covalent) into a new chemical compound.

Enolization

https://en.m.wikipedia.org/wiki/Enol

Zwitterion

https://en.m.wikipedia.org/wiki/Zwitterion

Chemiosmosis

https://en.m.wikipedia.org/wiki/Chemiosmosis